Isolation, identification and characterization of endophytic fungi of Bambusa oldhamii munro applied as antagonists to Pyricularia oryzae

Autores

  • Andreia Alves da Costa Silveira UFG
  • Leila Garcês Araújo UFG
  • Marta Cristina Corsi de Fillipi Empresa Brasileira de Pesquisa Agropecuária
  • Sérgio Tadeu Sibov UFG

Palavras-chave:

antagonism, antimicrobial activity, bamboo, bambusicolous fungi

Resumo

Endophytic fungi, in addition to improving plant development, may produce antimicrobial substances that can inhibit pathogens. The objective of this study was to isolate and characterize endophytic fungi of Bambusa oldhamii and evaluate in vitro antagonism to Pyricularia oryzae. Fungal isolates of B. oldhamii shoots were purified and identified by nuclear ribosomal DNA (nrDNA) including internal transcribed spacer regions (ITS1 and ITS4). These isolates were then confirmed by phylogenetic analysis of the ITS1 and ITS2 sequences and morphological analysis. The isolates were evaluated in in vitro experiments of direct and indirect antagonism (volatile production). Five fungal isolates were identified and named as follows: isolate 27 (Arthrinium sp.); isolate 29 (Acrocalymma sp.); isolate 122 (Botryobambusa fusicoccum); isolate 711 (Phoma sp.) and isolate 712 (Phoma sp.). We found that the area of the P.
oryzae colony was reduced by more than 80% by all endophytic isolates in this study, with emphasis on isolate 122, with a 96% reduction in area of the P. oryzae. These results were considered promising and will serve as a foundation for future studies on induction of resistance to P. oryzae.

Referências

Alcorn JL & Irwin JAG (1987) Acrocalymma medicaginis gen. et sp.nov. causing root and crown rot of Medicago sativa in Australia. Transations of the British Mycological Society, 88:163-167.

Aveskamp MM, Gruyter J & Crous PW (2008) Biology and recent developments in the systematics of Phoma, a complex genus of major quarantine significance. Fungal Diversity, 31:01-18.

Barnett HL & Hunter BB (1998) Illustrated Genera of Imperfect Fungi. 4a ed. Saint Paul, APS Press. 218p.

Bloor S (2008) Arthrinic acid, a novel antifungal polyhydroxyacid from Arthrinium phaeospermum. Jounal of Antibiotics, 61:515- 517.

Brzezinska MS & Jankiewicz U (2012) Production of antifungal chitinase by Aspergillus niger LOCK 62 and its potential role in the biological control. Current Microbiology, 65:666–672.

Busby PE, Ridout M & Newcombe G (2016) Fungal endophytes: modifiers of plant disease. Plant Molecular Biology, 90:645-655.

Calvo MA, Agut M, Calvo RM & Larrondo J (1999) Effect of ultraviolet light irradiation and nitrosoguanidine on viability of 46 strains of Arthrinium and their antibiotic production. Microbios, 98:179-187.

Carvalho JCB, Sousa KCI, Brito DC, Chaibub AA, Luzini AP, Côrtes MVCB, Filippi MCC, Kato L, Vaz BG, Costa HB, Romão W & Araújo GA (2015) Biocontrol potential of Waitea circinata, an orchid mycorrhizal fungus, against the rice blast fungus. Tropical Plant Pathology, 40:151-159.

Cattelan AJ (1999) Métodos qualitativos para determinação de características bioquímicas e fisiológicas associadas com bactérias promotoras do crescimento vegetal. Londrina, Embrapa soja. 36p. (Documentos, 139).

Chen Q, Jiang JR, Zhang GZ, Cai L & Crous PW (2015) Resolving the Phoma enigma. Studies in Mycology, 82:137-217.

Dai DQ, Phookamsak R, Wijayawardene NN, Li WJ, Bhat DJ, Xu JC, Taylor JE, Hyde KD & Chukeatirote E (2017) Bambusicolous fungi. Fungal Diversity, 82:1-105.

Dellaporta SL, Wood J & Hicks JB (1983) A plant DNA minipreparation: Version II. Plant Molecular Biology Reporter, 1:19-21.

Dennis C & Webster J (1971) Antagonistic properties of species-groups of Trichoderma: III. Hyphal interaction. Transations of the British Mycological Society, 57:363-369.

Ebada SS, Schulz B, Wray V, Totzke F, Kubbutat MHG, Müller WEG, Hamacher A, Kassack MU, Lin W & Proksch P (2011) Arthrinins A-D: Novel diterpenoids and further constituents from the sponge derived fungus Arthrinium sp. Bioorganic and Medicinal Chemistry, 19:4644-4651.

Gernah DI, Ariahu CC & Ingbian EK (2011) Effects of malting and lactic fermentation on some chemical and functional properties of maize (Zea mays). American Jounal of Food Technology, 6:404-412.

Gruyter J, Aveskamp MM, Woudenberg JHC, Verkley GJM, Groenewald JZ & Crous PW (2009) Molecular phylogeny of Phoma and allied anamorph genera: Towards a reclassification of the Phoma complex. Mycological Research, 113:508-519.

Hamayun M, Khan SA, Khan AL, Rehman G, Sohn EY, Shah AA, Kim SK, Joo GJ & Lee IJ (2009) Phoma herbarum as a new gibberellin-producing and plant growth-promoting fungus. Jounal of Microbiology and Biotechnology, 19:1244-1249.

Harman GE, Howell CR, Viterbo A, Chet I & Lorito M (2004) Trichoderma species -opportunistic, avirulent plant symbionts. Nature Reviews Microbiology, 2:43-56.

He Y & Zhang Z (2012) Diversity of organism in the Usnea longissima lichen. African Jounal of Microbiology Research, 6:4797-4804.

Jayasiri S (2017) Taxonomy and multigene phylogenetic evaluation of novel species in Boeremia and Epicoccum with new records of Ascochyta and Didymella (Didymellaceae). Mycosphere, 8:1080-1101.

Kumar S, Stecher G & Tamura K (2016) MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. Available at: <https://pubmed.ncbi.nlm.nih.gov/27004904/>. Accessed on: February 01st, 2019.

Li S, Peng Y, Zhu T, Zhu H, Mao C & Qiao T (2012) Diversity of epiphytic fungi on the diseased and healthy leaves of Bambusa. African Jounal of Microbiology Research, 6:7556-7563.

Lin CS, Kalpana K, Chang WC & Lin NS (2007) Improving multiple shoot proliferation in bamboo mosaic virus-free Bambusa oldhamii Munro propagation by liquid culture. HortScience, 42:1243-1246.

Liu JK, Phookamsak R, Doilom M, Wikee S, Li YM, Ariyawansha H, Boonmee S, Chomnunti P, Dai DQ, Bhat JD, Romero AI, Zhuang W, Monkai J, Jones EBG, Chukeatirote E, Ko TWK, Zhao Y, Wang Y & Hyde KD (2012) Towards a natural classification of Botryosphaeriales. Fungal Diversity, 57:149-210.

Lu Y, Song S, Wang R, Liu Z, Meng J, Sweetman AJ, Jenkins A, Ferrier RC, Li H, Luo W, & Wang T (2015) Impacts of soil and water pollution on food safety and health risks in China. Environment International, 77:05-15.

Da Luz WC (1990) Microbiological control of bipolaris sorokiniana in vitro. Fitopatologia Brasileira, 15:246-247.

Manter DK & Vivanco JM (2007) Use of the ITS primers, ITS1F and ITS4 to characterize fungal abundance and diversity in mixed-template samples by qPCR and length heterogeneity analysis. Jounal of Microbiology Methods, 71:07-14.

Martínez-Cano C, Grey W & Sands DC (1992) First report of Arthrinium arundinis causing kernel blight on barley. Plant Disease, 76:1077.

Meletiadis J, Meis JFGM & Mouton JW (2001) Analysis of Growth Characteristics of Filamentous Fungi in Different Nutrient Media. Jounal of Clinical Microbiology, 39:478-484.

Miao L, Kwong TFN & Qian PY (2006) Effect of culture conditions on mycelial growth, antibacterial activity, and metabolite profiles of the marine-derived fungus Arthrinium c.f. saccharicola. Applied Microbiology and Biotechnology, 72:1063-1073.

Miura K & Kudo MY (1970) An agar-medium for aquatic hyphomycetes. Transations of the Mycological Society of Japan, 11:116-118.

Mohanan C (1997) Diseases of bamboos in Asia: An illustrated manual. Beijing, INBAR. 228p.

Murashige T & Skoog F (1962) A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiology Plant, 15:473-497.

Naznin H, Kiyohara D, Kimura M, Miyazawa M, Shimizu M & Hyakumachi M (2014) Systemic resistance induced by volatile organic compounds emitted by plant growth-promoting fungi in Arabidopsis thaliana. PLoS One, 9:e86882.

Nei M & Kumar S (2000) Molecular Evolution and Phylogenetics. Oxford, Oxford University Press. 328p.

Nisa H, Kamili AN, Nawchoo IA, Shafi S, Shameem N & Bandh SA (2015) Fungal endophytes as prolific source of phytochemicals and other bioactive natural products: A review. Microbial Pathogenesis, 82:50-59.

Oses-Ruiz M, Sakulkoo W, Ittlejohn GR, Martin-Urdiroz M & Talbot NJ (2017) Two independent S-phase checkpoints regulate appressorium-mediated plant infection by the rice blast fungus Magnaporthe oryzae. Proceedings of the National Academy of Sciences of the United States Of America, 114:E237-E244.

Oyetayo VO, Dong CH & Yao YJ (2009) Antioxidant and Antimicrobial Properties of Aqueous Extract from Dictyophora indusiata. Open Mycology Journal, 3:20-26.

Pasqualini APA, Santos MC, Sant ́Anna-Santos BF, Fraga HPF & Quoirin M (2019) In vitro culture and diversity of endophytic fungi in Bambusa oldhamii. Pesquisa Agropecuária Tropical, 49:01-09.

Prabhu AS & Filippi MC (2001) Graus de resistência à brusone e produtividade de cultivares melhoradas de arroz de terras altas. Pesquisa Agropecuária Brasileira, 36:1453-1459.

Prabhu AS, Filippi MC & Castro N (1992) Pathogenic variation among isolates of Pyricularia oryzae affecting rice, wheat, and grasses in Brazil. Tropical Pest Management, 38:367-371.

Prabhu AS, Filippi MC, Silva GB, Lobo VLS & Morais OP (2009) An Unprecedented Outbreak of Rice Blast on a Newly Released Cultivar BRS Colosso in Brazil. In: Wang GL & Valent B (Eds.) Advances in Genetics, Genomics and Control Rice Blast Disease. New York, Springer. p. 257-266.

R Development Core Team (2017) R: A Language and environment for statistical computing. Vienna, R Foundation for Statistical Computing. Available at: <https://www.r-project.org/. Accessed on: July 01st, 2018.

Rai M, Deshmukh P, Gade A, Ingle A, Kövics GJ & Irinyi L (2009) Phoma saccardo: Distribution, secondary metabolite production and biotechnological applications. Critical Reviews in Microbiology, 35:182-196.

Ramos HP, Braun GH, Pupo MT & Said S (2010) Antimicrobial activity from endophytic fungi Arthrinium state of Apiospora montagnei Sacc. and Papulaspora immersa. Brazilian Archives of Biology and Technology, 53:629-632.

Saitou N & Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4:406-425.

Schulz B, Haas S, Junker C, Andrée N & Schobert M (2015) Fungal endophytes are involved in multiple balanced antagonisms. Currunt Science, 109:39-45.

Selim KA, El-Beih AA, AbdEl-Rahman TM & El-Diwany A (2012) Biology of Endophytic Fungi. Current Research in Environmental & Applied Mycology, 2:31-82.

Sharma G & Pandey RR (2010) Influence of culture media on growth , colony character and sporulation of fungi isolated from decaying vegetable wastes. Jounal of Yeast Fungal Reseach, 1:157-164.

Shen X, Zheng D, Gao J & Hou C (2012) Isolation and evaluation of endophytic fungi with antimicrobial ability from Phyllostachys edulis. Bangladesh Jounal of Pharmacology, 7:249-257.

Shukla A, Singh A, Tiwari D & Ahirwar BK (2016) Bambusicolous Fungi: A Reviewed Documentation. International Jounal of Pure & Applied Bioscience, 4:304-310.

Silva HSA, Silva Romeiro R, Macagnan D, Almeida Halfeld-Vieira B, Pereira MCB & Mounteer A (2004) Rhizobacterial induction of systemic resistance in tomato plants: Non-specific protection and increase in enzyme activities. Biological Control, 20:288-295.

Sudha V, Govindaraj R, Baskar K, Al-Dhabi NA & Duraipandiyan V (2016) Biological properties of Endophytic Fungi. Brazilian Archieves of Biology and Technology, 59:01-07.

Valenzuela-Lopez N, Cano-Lira JF, Guarro J, Sutton DA, Wiederhold N, Crous PW & Stchigel AM (2018) Coelomycetous Dothideomycetes with emphasis on the families Cucurbitariaceae and Didymellaceae. Studies in Mycology, 90:01-69.

Wang J, Wei X, Qin X, Lin X, Zhou X, Liao S, Yang B, Liu J, Tu Z & Liu Y (2015) Arthpyrones A-C, pyridone alkaloids from a sponge-derived fungus Arthrinium arundinis ZSDS1-F3. Organic Letters, 17:656-659.

White TJ, Bruns TD, Lee S & Taylor JW (1990) Amplification of Direct Sequencing Fungal Ribosomal RNA Genes for Phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ & White TJ (Eds.) PCR Protocols: A Guide to Methods and Applications. San Diego, Academic Press. p.315-322.

Wilson RA & Talbot NJ (2009) Under pressure: Investigating the biology of plant infection by Magnaporthe oryzae. Nature Reviews Microbiology, 7:185-195.

Yan X & Talbot NJ (2016) Investigating the cell biology of plant infection by the rice blast fungus Magnaporthe oryzae. Current Opinion in Microbiology, 34:147-153.

Zhang HW, Song YC & Tan RX (2006) Biology and chemistry of endophytes. Natural Products Reports, 25:753-771.

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Publicado

2025-05-13

Como Citar

Alves da Costa Silveira, A., Garcês Araújo, L., Corsi de Fillipi, M. C., & Sibov, S. T. (2025). Isolation, identification and characterization of endophytic fungi of Bambusa oldhamii munro applied as antagonists to Pyricularia oryzae. Revista Ceres, 67(4), 296–305. Recuperado de https://ojs.ceres.ufv.br/ceres/article/view/7811

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PLANT HEALTH

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